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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015869924.1_cds_XP_016433916.1_30024
CDS Infomation

[gene=LOC107760387] [db_xref=GeneID:107760387] [protein=AMSH-like ubiquitin thioesterase 1 isoform X3] [protein_id=XP_016433916.1] [location=complement(join(19232..19256,20085..20137,20380..20442,20817..20891,20992..21054,21140..21229,21338..21677,21875..21921,23347..23452,24024..24115,24720..24911,24987..25062,25717..25781,26748..26867))] [gbkey=CDS]
Sequence

ATGATGACGCGGTCGTCTTCTGGTCAAATCAACATCGAGGCGCGTACGAAGAAACTCGAT
GTAGATAATCGAATCTCTCTGAGAATTTACTATCGGATCGCTGATAATGTCCTCAAACAG
GCTGACATTTTCCGCGCAGAGGGAGACGTCATAGATTTATATGTCATGCTTCTTAGATTC
TCAAGTTTGGTCTCTGAGACAATACCATGCCATCGAGATTATCGAGCATCACTGCAGAGC
AACAAAATTTATCTAAAAAAGAGATTACTAAATGCTGTGGCTGAGCTTGAGCAACTGAAG
CCAATAGTTCAACAGAAACTCGAGGAGCTAAATAGAAAAAGCACATATCAAGTGAATAAG
GGGAACAATCATCATCAAAATACTCTTTTAGGATTCTCAGGAGAGTTTTATCCAGCCAAT
AAGCAAAACCCTAAGGCTTGTGGAACAACTAAGGTAGTAGCACCAGTTCGAGATTTTGTG
TCTCAAGTCCCAAGAACCCAGCAGTTTTTGCTTGTGAAGCCAGTAAATGAGCAGATGCGC
CATTTGTCACTTAGTATACCGCGACCAAAGGAAGAAACTCTGACCAGACATTCCATCCTG
GGTCCAAATGGACTTCGAGGACAGTGGCAACCTCCAGCTAGTGACAGAGGGGTGTCTTAT
CCAAGTAATGTTGACTTCACTCCTGTTCTAATCCCCAGGGAAAACAGGCTCCTGCAGCCT
CTAGAAAATGAATCCTTGGATAAAAAGGATGACGTCAGTTCAGAATGTGGAAAACCATGT
CTGGAATCTATGTTACCGGTAGATAGTGACAAGCCAGTGCTTCGTCTTGAAGAACCTGCT
TCATTGATTTCCTTTGATACAGAAGAAAGCCCTCTACAATCAGAAATCATTAGACAACCG
TCTCCTCCACCTGTTCTTGCAGAGGTACAAGATTTGATGCCACCTGCATCATCTCCAGTC
GATGAGGTGGAATGTGGATTGGTTAAATCATCACCTGATGGCCTAATCTGCTCTGAAGAA
CCATTGCAATTGCACATTTCCACATCTCTGATGGATGCATTCATGAAGCTAGCCAAGTCC
AATACTAACAAAAATCTGGAAACCTGTGGTGTTCTTGCTGGATCACTTAAAAACCGAAGA
TTTTATGTCACAGCTCTCATCATTCCCAAGCAGGAATCGACATCAGATTCGTGTCAAACT
ACAAATGAGGAGGAAATATTTGAAGTTCAAGATAAGCAATCACTGTTTCCCCTTGGGTGG
ATTCATACACATCCAACGCAATCATGTTTCATGTCATCCATTGATGTTCATACCCAGTAC
TCATATCAGATCATGTTGCCTGAAGCTATTGCAATTGTAATGGCCCCAAGAGACAGTTCA
AGCTTTATGGTGCTCAAATTCCAATGA

Peptide Sequence

PEP ID

XP_016433916.1
PEP Infomation

PREDICTED: AMSH-like ubiquitin thioesterase 1 isoform X3 [Nicotiana tabacum]
Sequence

MMTRSSSGQINIEARTKKLDVDNRISLRIYYRIADNVLKQADIFRAEGDVIDLYVMLLRF
SSLVSETIPCHRDYRASLQSNKIYLKKRLLNAVAELEQLKPIVQQKLEELNRKSTYQVNK
GNNHHQNTLLGFSGEFYPANKQNPKACGTTKVVAPVRDFVSQVPRTQQFLLVKPVNEQMR
HLSLSIPRPKEETLTRHSILGPNGLRGQWQPPASDRGVSYPSNVDFTPVLIPRENRLLQP
LENESLDKKDDVSSECGKPCLESMLPVDSDKPVLRLEEPASLISFDTEESPLQSEIIRQP
SPPPVLAEVQDLMPPASSPVDEVECGLVKSSPDGLICSEEPLQLHISTSLMDAFMKLAKS
NTNKNLETCGVLAGSLKNRRFYVTALIIPKQESTSDSCQTTNEEEIFEVQDKQSLFPLGW
IHTHPTQSCFMSSIDVHTQYSYQIMLPEAIAIVMAPRDSSSFMVLKFQ

Transcript Sequence

Gene sequence data has not been registered.